qsirecon.workflows.recon.utils module

Miscellaneous workflows

qsirecon.workflows.recon.utils.init_discard_repeated_samples_wf(inputs_dict, name='discard_repeats', qsirecon_suffix='', params={})

Remove a sample if a similar direction/gradient has already been sampled.

qsirecon.workflows.recon.utils.init_conform_dwi_wf(inputs_dict, name='conform_dwi', qsirecon_suffix='', params={})

If data were preprocessed elsewhere, ensure the gradients and images conform to LPS+ before running other parts of the pipeline.

qsirecon.workflows.recon.utils.init_conform_dwi_wf(inputs_dict, name='conform_dwi', qsirecon_suffix='', params={})

If data were preprocessed elsewhere, ensure the gradients and images conform to LPS+ before running other parts of the pipeline.

qsirecon.workflows.recon.utils.init_discard_repeated_samples_wf(inputs_dict, name='discard_repeats', qsirecon_suffix='', params={})

Remove a sample if a similar direction/gradient has already been sampled.

qsirecon.workflows.recon.utils.init_gradient_select_wf(inputs_dict, name='gradient_select_wf', qsirecon_suffix='', params={})

Remove a sample if a similar direction/gradient has already been sampled.

qsirecon.workflows.recon.utils.init_scalar_output_wf(name='scalar_output_wf')

Write out reconstructed scalar maps.

qsirecon.workflows.recon.utils.init_test_wf(inputs_dict, name='test_wf', qsirecon_suffix='test', params={})

A workflow for testing how derivatives will be saved.